Science Memes

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submitted 1 week ago by [email protected] to c/[email protected]

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[–] [email protected] 4 points 1 week ago* (last edited 1 week ago) (1 children)

We do, the major versions have tag releases like mm7, mm8, mm9, etc. as defined by the current build, and minor patch releases too like mm10p14 as new sequences come in.

https://hgdownload.cse.ucsc.edu/goldenpath/mm10/bigZips/

Example, say you have 5 sequences: CAT, ATC, ATCG, CGT, and ATATA.

One way of combining them up together to build a transcriptome is like this:

5 sequences:     ATATA
               CG-T  ATC
             ATCG CAT

  Reference: ATCGATATATC

ATCGATATATC isn't the only solution to these sequences, but as you get more sequences to try and overlap, the more the uncertainty goes down

[–] [email protected] 2 points 6 days ago

That’s really interesting, thanks for sharing